• Source: JASPAR

JASPAR is an open access and widely used database of manually curated, non-redundant transcription factor (TF) binding profiles stored as position frequency matrices (PFM) and transcription factor flexible models (TFFM) for TFs from species in six taxonomic groups. From the supplied PFMs, users may generate position-specific weight matrices (PWM). The JASPAR database was introduced in 2004. There were seven major updates and new releases in 2006, 2008, 2010, 2014, 2016, 2018, 2020 and 2022, which is the latest release of JASPAR.




Availability


The JASPAR database is an open-source and freely available for scientific community at http://jaspar.genereg.net/.




Similar databases


TRANSFAC – Transcription Factor Database
HOCOMOCO - HOmo sapiens COmprehensive MOdel COllection
PAZAR Archived 2017-09-12 at the Wayback Machine - Database with focus on experimentally validated transcription factor binding sites
TFe Archived 2017-09-18 at the Wayback Machine – the transcription factor encyclopedia
AnimalTFDB – Animal transcription factor database
PlantCARE – cis-regulatory elements and transcription factors in plants (2002)
RegTransBase - transcription factor binding sites in a diverse set of bacteria.
RegulonDB – Primary database on transcriptional regulation in Escherichia coli
TRRD – Transcription Regulatory Regions Database, mainly about regulatory regions and TF-binding sites
PlantRegMap Plant Transcriptional Regulatory Map
MethMotif An integrative database of cell-specific transcription factor binding site motifs coupled with DNA methylation profiles.




References

• Source: Jaspar

Jaspar is a surname. Notable people with the surname include:

Bobby Jaspar (1926–1963) cool jazz and hard bop saxophonist, flautist and composer born in Liège, Belgium
Henri Jaspar (1870–1939) Belgian Catholic Party politician and prime-minister
Jules Jaspar (1878–1963) Belgian Consul
Marcel-Henri Jaspar (1901–1982) Belgian diplomat
Jaspar von Oertzen (1912–2008), German stage, film and television actor
Jaspar Yu Woon Chai (born 1988), Bruneian badminton player




See also


JASPAR, a database of transcription factor (TF) binding profiles
Spelling variant of Caspar, one of the Three Biblical Magi
Jasper
Jaspur
Jesper

Kata Kunci Pencarian:

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