- Protein secondary structure
- Beta sheet
- Alpha helix
- List of disorder prediction software
- Hydrophobicity scales
- Ccdc60
- NetSurfP 3.0 - DTU Health Tech - Bioinformatic Services
- NetSurfP - 3.0 - BioLib
- NetSurfP 2.0 - DTU Health Tech - Bioinformatic Services
- NetSurfP-3.0: accurate and fast prediction of protein structural ...
- NetSurfP-3.0: accurate and fast prediction of protein structural ...
- GitHub - Eryk96/NetSurfP-3.0: NetSurfP 3.0: Protein secondary …
- NetSurfP-3.0 web server - DTU
- NetSurfP-2.0: improved prediction of protein structural ... - bioRxiv
- NetSurfP-2.0: Improved prediction of protein structural features by ...
- NetSurfP-3.0: accurate and fast prediction of protein structural ...
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NetSurfP 3.0 - DTU Health Tech - Bioinformatic Services
NetSurfP - 3.0 Protein secondary structure and relative solvent accessibility. This NetSurfP3 server predicts the surface accessibility, secondary structure, disorder, and phi / psi dihedral angles of amino acids in an amino acid sequence.
NetSurfP - 3.0 - BioLib
Additionally, we have created a Google Colaboratory notebook that explains step by step how to run NetSurfP-3.0 using BioLib. The plot shows the amino acid letter. The RSA is shown by a …
NetSurfP 2.0 - DTU Health Tech - Bioinformatic Services
NetSurfP-2.0 is sequence-based and uses an architecture composed of convolutional and long short-term memory neural networks trained on solved protein structures. Using a single integrated model, NetSurfP-2.0 predicts solvent accessibility, secondary structure, structural disorder, and backbone dihedral angles for each residue of the input ...
NetSurfP-3.0: accurate and fast prediction of protein structural ...
Jun 1, 2022 · NetSurfP-3.0 is consistently the fastest tool, being able to generate predictions for a thousand proteins in ∼100 s. From the runtime analysis, we see that the two fastest models are NetSurfP-3.0 and SPOT-1D-LM, with the former being 3.8–5.3 times faster than the latter.
NetSurfP-3.0: accurate and fast prediction of protein structural ...
Jul 5, 2022 · Here, we present NetSurfP-3.0, a tool for predicting solvent accessibility, secondary structure, structural disorder and backbone dihedral angles for each residue of an amino acid sequence.
GitHub - Eryk96/NetSurfP-3.0: NetSurfP 3.0: Protein secondary …
The repository contains the source code for the updated version of NetSurfP, which replaces HMM profiles with embeddings, from the pretrained model ESM-1b. The previous version of NetSurfP 2.0 is written with the Keras framework.
NetSurfP-3.0 web server - DTU
Here, we present NetSurfP-3.0, a tool for predicting solvent accessibility, secondary structure, structural disorder and backbone dihedral angles for each residue of an amino acid sequence.
NetSurfP-2.0: improved prediction of protein structural ... - bioRxiv
Apr 30, 2018 · NetSurfP-2.0 is sequence-based and uses an architecture composed of convolutional and long short-term memory neural networks trained on solved protein structures. Using a single integrated model, NetSurfP-2.0 predicts solvent accessibility, secondary structure, structural disorder, interface residues and backbone dihedral angles for each ...
NetSurfP-2.0: Improved prediction of protein structural features by ...
NetSurfP-2.0 is sequence-based and uses an architecture composed of convolutional and long short-term memory neural networks trained on solved protein structures. Using a single integrated model, NetSurfP-2.0 predicts solvent accessibility, secondary structure, structural disorder, and backbone dihedral angles for each residue of the input ...
NetSurfP-3.0: accurate and fast prediction of protein structural ...
Jun 1, 2022 · Here, we present NetSurfP-3.0, a tool for predicting solvent accessibility, secondary structure, structural disorder and backbone dihedral angles for each residue of an amino acid sequence.